Detailed information of matrix profile MA1677.1

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Profile summary
Name: NAC078
Matrix ID: MA1677.1
Class: GCM
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q84K00  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 1698 1965 9 5690 5496 1 4732 5341 5581 1103 1772 1780 ]
C [ 1538 1228 5734 18 255 9 228 98 49 2610 1650 951 ]
G [ 929 1361 9 58 22 5745 142 35 57 757 1053 1146 ]
T [ 1671 1282 84 70 63 81 734 362 149 1366 1361 1959 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1677.1 MA1677 1 NAC078 Arabidopsis thaliana
NAC GCM
MA1677.2 MA1677 2 NAC078 Arabidopsis thaliana
NAC GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0680.1

ChIP-seq Centrality
-log(P-value): 8016.56

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0680.1

ChIP-seq Centrality
-log(P-value): 7896.28

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: