Detailed information of matrix profile MA1675.1

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Profile summary
Name: NAC029
Matrix ID: MA1675.1
Class: GCM
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24477691
Uniprot ID: O49255  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 116 235 41 444 11 6 22 421 422 7 30 103 148 ]
C [ 93 50 211 1 429 4 294 11 2 388 66 75 106 ]
G [ 78 54 81 0 4 428 42 5 2 22 16 93 74 ]
T [ 159 107 113 1 2 8 88 9 20 29 334 175 118 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1675.1 MA1675 1 NAC029 Arabidopsis thaliana
NAC GCM
MA1675.2 MA1675 2 NAC029 Arabidopsis thaliana
NAC GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0678.1

ChIP-seq Centrality
-log(P-value): 1702.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0678.1

ChIP-seq Centrality
-log(P-value): 1698.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: