Detailed information of matrix profile MA1675.1

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Profile summary
Name: NAC029
Matrix ID: MA1675.1
Class: GCM
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24477691
Uniprot ID: O49255  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 118 175 334 29 20 9 88 8 2 1 113 107 159 ]
C [ 74 93 16 22 2 5 42 428 4 0 81 54 78 ]
G [ 106 75 66 388 2 11 294 4 429 1 211 50 93 ]
T [ 148 103 30 7 422 421 22 6 11 444 41 235 116 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1675.1 MA1675 1 NAC029 Arabidopsis thaliana
NAC GCM
MA1675.2 MA1675 2 NAC029 Arabidopsis thaliana
NAC GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0678.1

ChIP-seq Centrality
-log(P-value): 1702.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0678.1

ChIP-seq Centrality
-log(P-value): 1698.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: