Detailed information of matrix profile MA1671.1

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Profile summary
Name: ERF118
Matrix ID: MA1671.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25220462
Uniprot ID: Q9CA27  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 639 617 48 30 7 1 10 26 482 894 643 ]
C [ 1537 286 11 3190 3 2 3186 0 354 1143 234 ]
G [ 292 1903 3338 9 3370 3396 8 3343 2309 385 1819 ]
T [ 931 593 2 170 19 0 195 30 254 977 703 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1671.1 MA1671 1 ERF118 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1671.2 MA1671 2 ERF118 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0666.1

ChIP-seq Centrality
-log(P-value): 516.326

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0666.1

ChIP-seq Centrality
-log(P-value): 544.211

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: