Detailed information of matrix profile MA1669.1

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Profile summary
Name: DREB1B
Matrix ID: MA1669.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 19761621
Uniprot ID: P93835  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 837 656 539 2147 161 17 51 6 8 83 68 1085 1087 865 ]
C [ 512 746 576 102 235 12 34 2708 4 21 1879 445 396 667 ]
G [ 570 389 879 194 108 2697 44 14 2711 2617 33 789 726 486 ]
T [ 817 945 742 293 2232 10 2607 8 13 15 756 417 527 718 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1669.1 MA1669 1 DREB1B Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1669.2 MA1669 2 DREB1B Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0660.1

ChIP-seq Centrality
-log(P-value): 3639.04

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0660.1

ChIP-seq Centrality
-log(P-value): 3530.68

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: