Detailed information of matrix profile MA1667.2

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Profile summary
Name: HSFC1
Matrix ID: MA1667.2
Class: Heat
Family: HSF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 8689565
Uniprot ID: Q9LV52  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 271 342 53 11 15 15 682 15 1539 1448 447 367 ]
C [ 299 522 36 9 1521 80 99 15 6 14 305 613 ]
G [ 648 269 12 1 22 9 765 1538 7 45 470 292 ]
T [ 362 447 1479 1559 22 1476 34 12 28 73 358 308 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1667.1 MA1667 1 HSFC1 Arabidopsis thaliana
HSF Heat
MA1667.2 MA1667 2 HSFC1 Arabidopsis thaliana
HSF Heat
MA1667.3 MA1667 3 HSFC1 Arabidopsis thaliana
HSF Heat
     

-log(P-value) = 2316.38

TFFM details

TFFM ID: TFFM0903.1

ChIP-seq Centrality
-log(P-value): 3018.31

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0903.1

ChIP-seq Centrality
-log(P-value): 3295.91

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: