Detailed information of matrix profile MA1667.1

  1. Home
  2. Matrix > MA1667.1

Profile summary
Name: HSFC1
Matrix ID: MA1667.1
Class: Heat
Family: HSF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 8689565
Uniprot ID: Q9LV52  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 0 594 563 40 138 43 10 0 0 483 1 ]
C [ 0 0 0 127 241 18 0 597 65 15 0 ]
G [ 600 0 1 363 98 1 2 3 19 102 599 ]
T [ 0 6 36 70 123 538 588 0 516 0 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1667.1 MA1667 1 HSFC1 Arabidopsis thaliana
HSF Heat
MA1667.2 MA1667 2 HSFC1 Arabidopsis thaliana
HSF Heat
MA1667.3 MA1667 3 HSFC1 Arabidopsis thaliana
HSF Heat
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0674.1

ChIP-seq Centrality
-log(P-value): 3659.65

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0674.1

ChIP-seq Centrality
-log(P-value): 3852.61

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: