Detailed information of matrix profile MA1666.1

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Profile summary
Name: HSFB2B
Matrix ID: MA1666.1
Class: Heat
Family: HSF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 8689565
Uniprot ID: Q9T0D3  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 389 4 572 533 91 124 62 17 0 8 453 2 571 482 ]
C [ 27 0 2 4 120 220 18 0 585 79 19 0 2 14 ]
G [ 145 583 4 20 302 123 8 3 3 23 115 586 10 35 ]
T [ 27 1 10 31 75 121 500 568 0 478 1 0 5 57 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1666.1 MA1666 1 HSFB2B Arabidopsis thaliana
HSF Heat
MA1666.2 MA1666 2 HSFB2B Arabidopsis thaliana
HSF Heat
MA1666.3 MA1666 3 HSFB2B Arabidopsis thaliana
HSF Heat
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0673.1

ChIP-seq Centrality
-log(P-value): 3614.8

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0673.1

ChIP-seq Centrality
-log(P-value): 3650.12

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: