Detailed information of matrix profile MA1665.1

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Profile summary
Name: HSFB2A
Matrix ID: MA1665.1
Class: Heat
Family: HSF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24477691
Uniprot ID: Q9SCW4  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 43 43 36 403 2 587 547 95 89 21 12 11 ]
C [ 39 429 97 35 0 3 3 132 352 6 10 574 ]
G [ 11 17 6 157 598 0 4 274 78 0 0 3 ]
T [ 507 111 461 5 0 10 46 99 81 573 578 12 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1665.1 MA1665 1 HSFB2A Arabidopsis thaliana
HSF Heat
MA1665.2 MA1665 2 HSFB2A Arabidopsis thaliana
HSF Heat
MA1665.3 MA1665 3 HSFB2A Arabidopsis thaliana
HSF Heat
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0672.1

ChIP-seq Centrality
-log(P-value): 978.272

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0672.1

ChIP-seq Centrality
-log(P-value): 1004.12

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: