Detailed information of matrix profile MA1662.1

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Profile summary
Name: AT3G10030
Matrix ID: MA1662.1
Class: Tryptophan
Family: Trihelix
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 31133749
Uniprot ID: Q94JR1  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 400 297 216 75 24 26 22 11 11 964 829 281 299 ]
C [ 124 225 234 9 962 199 8 16 22 4 55 316 122 ]
G [ 212 188 182 53 8 20 958 11 12 12 60 117 254 ]
T [ 274 300 378 873 16 765 22 972 965 30 66 296 335 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1662.1 MA1662 1 AT3G10030 Arabidopsis thaliana
Trihelix Tryptophan
MA1662.2 MA1662 2 AT3G10030 Arabidopsis thaliana
Trihelix Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0651.1

ChIP-seq Centrality
-log(P-value): 956.459

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0651.1

ChIP-seq Centrality
-log(P-value): 1031.62

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: