Detailed information of matrix profile MA1661.1

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Profile summary
Name: GTL1
Matrix ID: MA1661.1
Class: Tryptophan
Family: Trihelix
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21169508
Uniprot ID: A0A1P8ATX4  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 492 314 24 42 48 300 1038 1033 996 954 409 356 ]
C [ 95 253 7 5 3 17 5 13 11 18 126 124 ]
G [ 203 127 1023 1020 93 74 12 10 13 23 138 193 ]
T [ 283 379 19 6 929 682 18 17 53 78 400 400 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1661.1 MA1661 1 GTL1 Arabidopsis thaliana
Trihelix Tryptophan
MA1661.2 MA1661 2 GTL1 Arabidopsis thaliana
Trihelix Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0650.1

ChIP-seq Centrality
-log(P-value): 939.603

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0650.1

ChIP-seq Centrality
-log(P-value): 890.733

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: