Detailed information of matrix profile MA1647.1

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Profile summary
Name: PRDM4
Matrix ID: MA1647.1
Class: C2H2
Family: Factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 23918801
Uniprot ID: Q9UKN5  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1799 2962 292 6811 6288 6889 39 5543 154 2123 1559 ]
C [ 1344 726 129 111 393 82 6813 566 316 2079 2553 ]
G [ 1532 1456 6353 138 405 137 110 286 6504 1012 1163 ]
T [ 2580 2111 481 195 169 147 293 860 281 2041 1980 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1647.1 MA1647 1 PRDM4 Homo sapiens
Factors C2H2
MA1647.2 MA1647 2 Prdm4 Mus musculus
Factors C2H2
MA1647.3 MA1647 3 Prdm4 Mus musculus
Factors C2H2
     

-log(P-value) = 200.734

TFFM details

TFFM ID: TFFM0688.1

ChIP-seq Centrality
-log(P-value): 615.116

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0688.1

ChIP-seq Centrality
-log(P-value): 730.63

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: