Detailed information of matrix profile MA1620.1

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Profile summary
Name: Ptf1A
Matrix ID: MA1620.1
Class: Basic
Family: Tal-related
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 23754747
Uniprot ID: Q9QX98  
Source: 30462313
Comment: TF

Sequence logo

Frequency matrix

         
A [ 2834 2613 6867 184 10033 116 256 85 68 527 1678 2293 ]
C [ 2469 3700 1188 9887 60 8567 9612 94 109 1615 2527 3004 ]
G [ 2664 2379 1410 113 84 1182 294 98 9972 1516 3341 2183 ]
T [ 2324 1599 826 107 114 426 129 10014 142 6633 2745 2811 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1620.1 MA1620 1 Ptf1A Mus musculus
Tal-related Basic
MA1620.2 MA1620 2 Ptf1A Mus musculus
Tal-related Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0888.1

ChIP-seq Centrality
-log(P-value): 22344.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0888.1

ChIP-seq Centrality
-log(P-value): 22310.7

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: