Detailed information of matrix profile MA1616.1

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Profile summary
Name: Prdm15
Matrix ID: MA1616.1
Class: C2H2
Family: Factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 28740264
Uniprot ID: E9Q8T2  
Source: 30462313
Comment:

Sequence logo

Frequency matrix

         
A [ 602 364 172 24 12 1628 22 128 146 48 24 31 327 364 553 ]
C [ 460 748 220 2126 2199 28 107 101 152 200 58 135 1333 920 560 ]
G [ 635 438 314 23 7 361 1886 1941 138 47 34 60 325 329 486 ]
T [ 540 687 1531 64 19 220 222 67 1801 1942 2121 2011 252 624 638 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1616.1 MA1616 1 Prdm15 Mus musculus
Factors C2H2
MA1616.2 MA1616 2 Prdm15 Mus musculus
Factors C2H2
     

-log(P-value) = 519.975

TFFM details

TFFM ID: TFFM0565.1

ChIP-seq Centrality
-log(P-value): 2052.78

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0565.1

ChIP-seq Centrality
-log(P-value): 2196.99

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: