Detailed information of matrix profile MA1608.1

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Profile summary
Name: Isl1
Matrix ID: MA1608.1
Class: Homeo
Family: HD-LIM
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 18585359
Uniprot ID: P61372  
Source: 30462313
Comment:

Sequence logo

Frequency matrix

         
A [ 1285 1485 436 110 5430 5482 32 266 379 1793 1340 ]
C [ 1392 1318 3702 20 39 34 99 54 192 1473 1408 ]
G [ 1472 1745 410 45 104 54 30 4885 4710 1295 1057 ]
T [ 1488 1089 1089 5462 64 67 5476 432 356 1076 1832 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1608.1 MA1608 1 Isl1 Mus musculus
HD-LIM Homeo
MA1608.2 MA1608 2 Isl1 Mus musculus
HD-LIM Homeo
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0512.1

ChIP-seq Centrality
-log(P-value): 20314.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0512.1

ChIP-seq Centrality
-log(P-value): 20466.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: