Detailed information of matrix profile MA1600.1

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Profile summary
Name: ZNF684
Matrix ID: MA1600.1
Class: C2H2
Family: More
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 25690854
Uniprot ID: Q5T5D7  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 127 619 1224 1107 3 92 6 61 220 67 10 1259 74 131 19 19 721 206 ]
C [ 326 514 14 18 0 7 10 63 57 2 25 59 1135 110 9 68 314 362 ]
G [ 201 168 59 129 1263 1229 1253 1226 9 1221 1236 14 216 11 1253 24 403 168 ]
T [ 606 216 56 249 0 7 44 3 1012 40 13 9 60 1184 9 1238 82 524 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1600.1 MA1600 1 ZNF684 Homo sapiens
More C2H2
MA1600.2 MA1600 2 ZNF684 Homo sapiens
More C2H2
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0646.1

ChIP-seq Centrality
-log(P-value): 263.522

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0646.1

ChIP-seq Centrality
-log(P-value): 265.869

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: