Detailed information of matrix profile MA1576.1

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Profile summary
Name: THRB
Matrix ID: MA1576.1
Class: Nuclear
Family: Thyroid
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 19741045
Uniprot ID: P10828  
Source: 28473536
Comment: TF

Sequence logo

Frequency matrix

         
A [ 0 214 389 4 2 86 3 393 0 54 9 151 389 20 17 71 45 381 82 ]
C [ 74 73 0 3 0 0 389 6 205 71 89 93 38 59 4 17 389 0 157 ]
G [ 8 175 9 389 389 11 0 0 86 221 28 134 75 389 389 19 89 8 31 ]
T [ 323 0 0 7 0 389 0 0 102 42 263 11 13 0 0 389 28 0 119 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1576.1 MA1576 1 THRB Homo sapiens
Thyroid Nuclear
MA1576.2 MA1576 2 THRB Homo sapiens
Thyroid Nuclear
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0885.1

ChIP-seq Centrality
-log(P-value): 2629.37

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0885.1

ChIP-seq Centrality
-log(P-value): 2516.3

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: