Detailed information of matrix profile MA1574.1

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Profile summary
Name: THRB
Matrix ID: MA1574.1
Class: Nuclear
Family: Thyroid
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 19741045
Uniprot ID: P10828  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 2340 225 2555 8626 2010 61 11 1587 13 1851 8626 1892 392 74 1219 ]
C [ 2160 3668 726 1400 8626 8626 1900 2025 817 824 726 8626 8626 4579 3705 ]
G [ 2190 148 8626 246 14 6 43 165 16 8626 132 14 52 234 1397 ]
T [ 1936 8626 136 23 36 24 8626 8626 8626 35 20 104 167 4047 2306 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1574.1 MA1574 1 THRB Homo sapiens
Thyroid Nuclear
MA1574.2 MA1574 2 THRB Homo sapiens
Thyroid Nuclear
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0609.1

ChIP-seq Centrality
-log(P-value): 3137.61

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0609.1

ChIP-seq Centrality
-log(P-value): 2364.64

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: