Detailed information of matrix profile MA1573.1

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Profile summary
Name: THAP11
Matrix ID: MA1573.1
Class: C2CH
Family: THAP-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 20581084
Uniprot ID: Q96EK4  
Source: 30462313
Comment: Matches

Sequence logo

Frequency matrix

         
A [ 35 25 29 5 4 1 6 426 265 214 7 3 14 433 2 1 8 18 72 ]
C [ 85 89 365 58 2 1 1 5 47 33 34 1 10 1 1 2 243 214 152 ]
G [ 84 184 23 5 443 448 440 17 107 39 8 446 16 15 448 5 5 19 73 ]
T [ 247 153 34 383 2 1 4 3 32 165 402 1 411 2 0 443 195 200 154 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1573.1 MA1573 1 THAP11 Homo sapiens
THAP-related C2CH
MA1573.2 MA1573 2 Thap11 Mus musculus
THAP-related C2CH
     

-log(P-value) = 416.932

TFFM details

TFFM ID: TFFM0608.1

ChIP-seq Centrality
-log(P-value): 314.459

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0608.1

ChIP-seq Centrality
-log(P-value): 299.423

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: