Detailed information of matrix profile MA1573.1

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Profile summary
Name: THAP11
Matrix ID: MA1573.1
Class: C2CH
Family: THAP-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 20581084
Uniprot ID: Q96EK4  
Source: 30462313
Comment: Matches

Sequence logo

Frequency matrix

         
A [ 154 200 195 443 0 2 411 1 402 165 32 3 4 1 2 383 34 153 247 ]
C [ 73 19 5 5 448 15 16 446 8 39 107 17 440 448 443 5 23 184 84 ]
G [ 152 214 243 2 1 1 10 1 34 33 47 5 1 1 2 58 365 89 85 ]
T [ 72 18 8 1 2 433 14 3 7 214 265 426 6 1 4 5 29 25 35 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1573.1 MA1573 1 THAP11 Homo sapiens
THAP-related C2CH
MA1573.2 MA1573 2 Thap11 Mus musculus
THAP-related C2CH
     

-log(P-value) = 416.932

TFFM details

TFFM ID: TFFM0608.1

ChIP-seq Centrality
-log(P-value): 314.459

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0608.1

ChIP-seq Centrality
-log(P-value): 299.423

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: