Detailed information of matrix profile MA1568.1

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Profile summary
Name: TCF21
Matrix ID: MA1568.1
Class: Basic
Family: Tal-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 25215497
Uniprot ID: O43680  
Source: 28473536
Comment: TF

Sequence logo

Frequency matrix

         
A [ 105 431 339 18 872 0 872 14 2 28 194 186 ]
C [ 315 6 533 872 0 71 67 164 12 205 352 175 ]
G [ 150 441 86 0 107 43 54 0 872 872 20 398 ]
T [ 301 87 19 4 21 872 0 872 4 89 872 113 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1568.1 MA1568 1 TCF21 Homo sapiens
Tal-related Basic
MA1568.2 MA1568 2 TCF21 Homo sapiens
Tal-related Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0881.1

ChIP-seq Centrality
-log(P-value): 13123.6

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0881.1

ChIP-seq Centrality
-log(P-value): 10151.9

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: