Detailed information of matrix profile MA1519.1

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Profile summary
Name: LHX5
Matrix ID: MA1519.1
Class: Homeo
Family: HD-LIM
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: Q9H2C1  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 1333 0 7142 7142 0 0 5049 1215 ]
C [ 1483 160 28 0 0 0 0 3721 ]
G [ 1576 0 144 0 0 187 2093 3420 ]
T [ 2749 7142 0 0 7142 7142 0 394 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1519.1 MA1519 1 LHX5 Homo sapiens
HD-LIM Homeo
MA1519.2 MA1519 2 LHX5 Homo sapiens
HD-LIM Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: