Detailed information of matrix profile MA1518.1

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Profile summary
Name: LHX1
Matrix ID: MA1518.1
Class: Homeo
Family: HD-LIM
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: P48742  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 2986 2105 14954 14954 569 2084 5724 2918 ]
C [ 3908 617 3100 0 39 4035 572 5234 ]
G [ 5037 495 5413 0 270 4878 9230 4118 ]
T [ 3023 14954 1101 0 14954 14954 949 2684 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1518.1 MA1518 1 LHX1 Homo sapiens
HD-LIM Homeo
MA1518.2 MA1518 2 Lhx1 Mus musculus
HD-LIM Homeo
MA1518.3 MA1518 3 Lhx1 Mus musculus
HD-LIM Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: