Detailed information of matrix profile MA1457.1

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Profile summary
Name: grh
Matrix ID: MA1457.1
Class: Grainyhead
Family: Grainyhead-related
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: ChIP-seq
Validation: 28760809
Uniprot ID: P13002  
Source: 30413482
Comment: Matches

Sequence logo

Frequency matrix

         
A [ 1170 1915 3090 3211 29 187 1914 20 49 58 358 546 754 ]
C [ 730 477 27 20 3265 2825 194 57 34 96 569 786 933 ]
G [ 883 535 89 57 18 199 838 3221 23 23 407 818 783 ]
T [ 549 405 126 44 20 121 386 34 3226 3155 1998 1182 862 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1457.1 MA1457 1 grh Drosophila melanogaster
Grainyhead-related Grainyhead
MA1457.2 MA1457 2 grh Drosophila melanogaster
Grainyhead-related Grainyhead
     

-log(P-value) = 765.64

TFFM details

TFFM ID: TFFM0495.1

ChIP-seq Centrality
-log(P-value): 2549.04

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0495.1

ChIP-seq Centrality
-log(P-value): 2605.41

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: