Detailed information of matrix profile MA1424.1

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Profile summary
Name: ERF019
Matrix ID: MA1424.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 31133749
Uniprot ID: O80542  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 203 248 265 229 35 0 70 0 0 0 0 16 263 298 218 ]
C [ 191 293 152 90 132 0 5 1000 0 0 97 3 144 328 120 ]
G [ 330 172 288 359 90 1000 127 0 1000 1000 0 949 528 97 468 ]
T [ 275 285 293 320 741 0 796 0 0 0 902 30 63 275 192 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1424.1 MA1424 1 ERF019 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1424.2 MA1424 2 ERF019 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: