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Detailed information of matrix profile
MA1417.1
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Matrix > MA1417.1
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Examples:
SPI1
,
P17676
,
ChIP-seq
,
Homo sapiens
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Profile summary
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Name:
O2
Matrix ID:
MA1417.1
Class:
Basic
Family:
Group
Collection:
CORE
Taxon:
Plants
Species:
Zea mays
Data Type:
ChIP-seq
Validation:
25215497
Uniprot ID:
P12959
Source:
25691733
Comment:
Sequence logo
Download SVG
Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
306
129
29
56
3
2021
18
354
4
19
1961
37
124
]
C [
374
391
9
1959
2016
3
1485
103
13
1991
11
282
1672
]
G [
1046
151
1895
12
17
12
7
1571
2
28
62
412
97
]
T [
312
1367
105
11
2
2
528
10
2019
0
4
1307
145
]
Binding sites information
No Binding sites available for this model.
External links
Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
Wordclouds
More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA1417.1
MA1417
1
O2
Zea mays
Group
Basic
MA1417.2
MA1417
2
O2
Zea mays
Group
Basic
JASPAR
TRANSFAC
MEME
RAW PFM
×
There is no centrality information of the model.
×
TFFM first order profile doesn't exist for this profile.
×
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
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GC Content: