Detailed information of matrix profile MA1389.1

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Profile summary
Name: PHL1
Matrix ID: MA1389.1
Class: Tryptophan
Family: GARP_G2-like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q8GUN5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 385 334 325 38 482 600 0 599 0 46 2 0 226 317 154 ]
C [ 87 66 49 2 49 0 1 1 0 14 597 263 122 61 76 ]
G [ 85 105 188 545 25 0 59 0 1 43 1 154 125 44 101 ]
T [ 43 95 38 15 44 0 540 0 599 497 0 183 127 178 269 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1389.1 MA1389 1 PHL1 Arabidopsis thaliana
GARP_G2-like Tryptophan
MA1389.2 MA1389 2 PHL1 Arabidopsis thaliana
GARP_G2-like Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0276.1

ChIP-seq Centrality
-log(P-value): 11649.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0276.1

ChIP-seq Centrality
-log(P-value): 11602.0

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: