Detailed information of matrix profile MA1387.2

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Profile summary
Name: HRS1
Matrix ID: MA1387.2
Class: Tryptophan
Family: GARP_G2-like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9FX67  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 275 0 545 596 0 191 28 80 101 65 390 111 ]
C [ 28 0 4 0 0 405 20 61 250 97 34 45 ]
G [ 250 596 22 0 0 0 0 32 101 302 71 48 ]
T [ 43 0 25 0 596 0 548 423 144 132 101 392 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1387.1 MA1387 1 HRS1 Arabidopsis thaliana
GARP_G2-like Tryptophan
MA1387.2 MA1387 2 HRS1 Arabidopsis thaliana
GARP_G2-like Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: