Detailed information of matrix profile MA1384.1

  1. Home
  2. Matrix > MA1384.1

Profile summary
Name: PHL7
Matrix ID: MA1384.1
Class: Tryptophan
Family: GARP_G2-like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9SJW0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 185 37 453 595 0 598 0 60 0 0 100 131 106 ]
C [ 114 5 13 0 0 0 0 1 598 215 110 94 90 ]
G [ 273 542 44 0 67 0 0 86 0 122 87 24 58 ]
T [ 26 14 88 3 531 0 598 451 0 261 301 349 344 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1384.1 MA1384 1 PHL7 Arabidopsis thaliana
GARP_G2-like Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0249.1

ChIP-seq Centrality
-log(P-value): 15471.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0249.1

ChIP-seq Centrality
-log(P-value): 15403.9

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: