Detailed information of matrix profile MA1383.1

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Profile summary
Name: KAN2
Matrix ID: MA1383.1
Class: Tryptophan
Family: GARP_G2-like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9C616  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 116 123 159 1 212 214 0 214 44 51 47 28 88 112 72 ]
C [ 12 12 0 0 0 0 0 0 0 8 113 49 24 14 16 ]
G [ 40 55 48 210 0 0 0 0 0 18 24 44 44 43 52 ]
T [ 46 24 7 3 2 0 214 0 170 137 30 93 58 45 74 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1383.1 MA1383 1 KAN2 Arabidopsis thaliana
GARP_G2-like Tryptophan
MA1383.2 MA1383 2 KAN2 Arabidopsis thaliana
GARP_G2-like Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: