Detailed information of matrix profile MA1381.1

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Profile summary
Name: AT3G46070
Matrix ID: MA1381.1
Class: C2H2
Family: C2H2
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24567191
Uniprot ID: Q9LX86  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 58 52 106 35 202 0 2 0 193 71 91 68 69 69 90 ]
C [ 16 13 10 22 0 0 0 0 0 19 14 16 8 15 14 ]
G [ 65 78 44 131 0 200 0 202 0 64 79 55 47 91 53 ]
T [ 63 59 42 14 0 2 200 0 9 48 18 63 78 27 45 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1381.1 MA1381 1 AT3G46070 Arabidopsis thaliana
C2H2 C2H2
MA1381.2 MA1381 2 AT3G46070 Arabidopsis thaliana
C2H2 C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: