Detailed information of matrix profile MA1374.1

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Profile summary
Name: IDD7
Matrix ID: MA1374.1
Class: C2H2
Family: IDD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24039602
Uniprot ID: Q8H1F5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 138 179 137 80 5 1 0 0 1 0 17 3 24 95 146 69 18 119 ]
C [ 108 62 66 39 29 6 11 0 0 583 57 23 88 0 36 197 153 44 ]
G [ 95 77 89 25 11 2 0 585 9 0 375 31 49 1 3 224 20 232 ]
T [ 244 267 293 441 540 576 574 0 575 2 136 528 424 489 400 95 394 190 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1374.1 MA1374 1 IDD7 Arabidopsis thaliana
IDD C2H2
MA1374.2 MA1374 2 IDD7 Arabidopsis thaliana
IDD C2H2
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0352.1

ChIP-seq Centrality
-log(P-value): 10957.5

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0352.1

ChIP-seq Centrality
-log(P-value): 10806.9

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: