Detailed information of matrix profile MA1362.1

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Profile summary
Name: bHLH77
Matrix ID: MA1362.1
Class: Basic
Family: bHLH
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21335373
Uniprot ID: Q9LK48  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 27 11 0 75 0 6 0 0 30 15 19 30 25 22 7 ]
C [ 28 0 75 0 75 0 1 0 22 40 22 10 32 12 35 ]
G [ 10 36 0 0 0 69 0 75 23 7 13 4 2 13 12 ]
T [ 10 28 0 0 0 0 74 0 0 13 21 31 16 28 21 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1362.1 MA1362 1 bHLH77 Arabidopsis thaliana
bHLH Basic
MA1362.2 MA1362 2 bHLH77 Arabidopsis thaliana
bHLH Basic
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: