Detailed information of matrix profile MA1361.2

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Profile summary
Name: bHLH18
Matrix ID: MA1361.2
Class: Basic
Family: bHLH
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21335373
Uniprot ID: Q1PF17  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 4 191 0 2 4 0 64 88 97 60 133 6 51 32 19 ]
C [ 197 0 192 0 4 0 15 31 29 116 8 153 7 58 20 ]
G [ 0 3 0 199 0 190 61 27 15 13 32 4 143 2 128 ]
T [ 0 7 9 0 193 11 61 55 60 12 28 38 0 109 34 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1361.1 MA1361 1 bHLH18 Arabidopsis thaliana
bHLH Basic
MA1361.2 MA1361 2 bHLH18 Arabidopsis thaliana
bHLH Basic
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: