Detailed information of matrix profile MA1357.1

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Profile summary
Name: bHLH80
Matrix ID: MA1357.1
Class: Basic
Family: bHLH
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21335373
Uniprot ID: Q9C8P8  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 132 104 1 595 595 0 0 1 0 146 235 ]
C [ 38 18 594 0 0 0 0 0 0 277 140 ]
G [ 103 429 0 0 0 595 0 235 595 81 49 ]
T [ 322 44 0 0 0 0 595 359 0 91 171 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1357.1 MA1357 1 bHLH80 Arabidopsis thaliana
bHLH Basic
MA1357.2 MA1357 2 bHLH80 Arabidopsis thaliana
bHLH Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0299.1

ChIP-seq Centrality
-log(P-value): 22680.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0299.1

ChIP-seq Centrality
-log(P-value): 22618.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: