Detailed information of matrix profile MA1348.1

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Profile summary
Name: TGA9
Matrix ID: MA1348.1
Class: Basic
Family: Group
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 8487298
Uniprot ID: Q93XM6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 264 0 0 591 0 44 0 66 583 0 9 ]
C [ 76 25 24 0 581 0 1 526 1 76 481 ]
G [ 239 0 552 0 0 548 0 0 0 198 51 ]
T [ 13 567 16 1 11 0 591 0 8 318 51 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1348.1 MA1348 1 TGA9 Arabidopsis thaliana
Group Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0407.1

ChIP-seq Centrality
-log(P-value): 9994.43

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0407.1

ChIP-seq Centrality
-log(P-value): 9804.64

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: