Detailed information of matrix profile MA1346.1

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Profile summary
Name: TGA10
Matrix ID: MA1346.1
Class: Basic
Family: Group
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 8487298
Uniprot ID: E3VNM4  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 193 256 118 45 316 0 4 590 0 6 12 34 524 34 135 ]
C [ 72 90 122 53 200 0 0 0 559 0 5 505 0 258 184 ]
G [ 216 107 54 473 77 0 550 3 1 587 1 48 48 98 83 ]
T [ 112 140 299 22 0 593 39 0 33 0 575 6 21 203 191 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1346.1 MA1346 1 TGA10 Arabidopsis thaliana
Group Basic
MA1346.2 MA1346 2 TGA10 Arabidopsis thaliana
Group Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0401.1

ChIP-seq Centrality
-log(P-value): 1578.41

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0401.1

ChIP-seq Centrality
-log(P-value): 1578.41

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: