Detailed information of matrix profile MA1344.1

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Profile summary
Name: BZIP28
Matrix ID: MA1344.1
Class: Basic
Family: Group
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 8487298
Uniprot ID: Q9SG86  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 86 27 141 0 548 0 4 0 51 339 56 130 229 165 159 ]
C [ 118 1 407 542 0 544 0 2 315 3 174 254 91 103 147 ]
G [ 42 431 0 0 0 0 544 0 181 79 69 39 90 108 65 ]
T [ 302 89 0 6 0 4 0 546 1 127 249 125 138 172 177 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1344.1 MA1344 1 BZIP28 Arabidopsis thaliana
Group Basic
MA1344.2 MA1344 2 BZIP28 Arabidopsis thaliana
Group Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0304.1

ChIP-seq Centrality
-log(P-value): 2772.91

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0304.1

ChIP-seq Centrality
-log(P-value): 2764.39

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: