Detailed information of matrix profile MA1340.1

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Profile summary
Name: BZIP3
Matrix ID: MA1340.1
Class: Basic
Family: Group
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 8487298
Uniprot ID: Q9LFU3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 176 199 150 27 169 38 0 574 0 3 0 0 0 129 314 ]
C [ 69 95 55 10 307 56 70 0 566 8 0 0 3 431 78 ]
G [ 182 109 57 439 75 1 452 0 3 561 0 574 459 2 113 ]
T [ 147 171 312 98 23 479 52 0 5 2 574 0 112 12 69 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1340.1 MA1340 1 BZIP3 Arabidopsis thaliana
Group Basic
MA1340.2 MA1340 2 BZIP3 Arabidopsis thaliana
Group Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0305.1

ChIP-seq Centrality
-log(P-value): 15987.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0305.1

ChIP-seq Centrality
-log(P-value): 16014.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: