Detailed information of matrix profile MA1318.1

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Profile summary
Name: WRKY27
Matrix ID: MA1318.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q9FLX8  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 377 521 542 574 0 2 0 600 600 42 36 175 128 ]
C [ 89 2 2 0 0 3 600 0 0 554 48 167 129 ]
G [ 64 34 10 20 600 0 0 0 0 1 345 125 65 ]
T [ 70 43 46 6 0 595 0 0 0 3 171 133 278 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1318.1 MA1318 1 WRKY27 Arabidopsis thaliana
WRKY GCM
MA1318.2 MA1318 2 WRKY27 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0419.1

ChIP-seq Centrality
-log(P-value): 8300.39

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0419.1

ChIP-seq Centrality
-log(P-value): 8351.75

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: