Detailed information of matrix profile MA1316.1

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Profile summary
Name: WRKY71
Matrix ID: MA1316.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q93WV4  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 94 29 0 0 0 598 0 4 55 55 77 ]
C [ 294 4 0 0 0 0 598 40 20 36 69 ]
G [ 82 408 0 0 598 0 0 2 13 32 103 ]
T [ 128 157 598 598 0 0 0 552 510 475 349 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1316.1 MA1316 1 WRKY71 Arabidopsis thaliana
WRKY GCM
MA1316.2 MA1316 2 WRKY71 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0430.1

ChIP-seq Centrality
-log(P-value): 23440.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0430.1

ChIP-seq Centrality
-log(P-value): 23207.7

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: