Detailed information of matrix profile MA1311.1

  1. Home
  2. Matrix > MA1311.1

Profile summary
Name: WRKY28
Matrix ID: MA1311.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q8VWJ2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 296 390 422 478 0 0 0 596 592 170 135 215 170 ]
C [ 127 65 29 6 0 0 598 2 0 357 85 131 160 ]
G [ 72 56 34 99 598 0 0 0 6 15 271 96 56 ]
T [ 103 87 113 15 0 598 0 0 0 56 107 156 212 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1311.1 MA1311 1 WRKY28 Arabidopsis thaliana
WRKY GCM
MA1311.2 MA1311 2 WRKY28 Arabidopsis thaliana
WRKY GCM
MA1311.3 MA1311 3 WRKY28 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0420.1

ChIP-seq Centrality
-log(P-value): 19313.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0420.1

ChIP-seq Centrality
-log(P-value): 19182.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: