Detailed information of matrix profile MA1310.1

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Profile summary
Name: WRKY42
Matrix ID: MA1310.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q9XEC3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 106 144 137 206 0 0 2 309 309 7 46 84 69 106 101 69 57 101 143 135 111 ]
C [ 92 38 37 7 0 0 307 0 0 301 28 89 93 49 39 30 55 92 68 58 70 ]
G [ 48 45 38 90 309 0 0 0 0 0 184 69 51 79 88 92 72 41 34 45 73 ]
T [ 63 82 97 6 0 309 0 0 0 1 51 67 96 75 81 118 125 75 64 71 55 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1310.1 MA1310 1 WRKY42 Arabidopsis thaliana
WRKY GCM
MA1310.2 MA1310 2 WRKY42 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: