Detailed information of matrix profile MA1307.1

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Profile summary
Name: WRKY31
Matrix ID: MA1307.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q93WT0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 68 59 72 76 86 109 108 90 86 124 131 188 0 0 1 251 251 7 30 ]
C [ 33 32 56 46 58 35 33 64 74 32 28 0 0 0 250 0 0 244 17 ]
G [ 77 82 63 45 27 33 73 35 38 35 39 63 251 0 0 0 0 0 169 ]
T [ 73 78 60 84 80 74 37 62 53 60 53 0 0 251 0 0 0 0 35 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1307.1 MA1307 1 WRKY31 Arabidopsis thaliana
WRKY GCM
MA1307.2 MA1307 2 WRKY31 Arabidopsis thaliana
WRKY GCM
MA1307.3 MA1307 3 WRKY31 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0841.1

ChIP-seq Centrality
-log(P-value): 236.776

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0841.1

ChIP-seq Centrality
-log(P-value): 238.318

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: