Detailed information of matrix profile MA1307.1

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Profile summary
Name: WRKY31
Matrix ID: MA1307.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q93WT0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 35 0 0 0 0 251 0 0 53 60 53 62 37 74 80 84 60 78 73 ]
C [ 169 0 0 0 0 0 251 63 39 35 38 35 73 33 27 45 63 82 77 ]
G [ 17 244 0 0 250 0 0 0 28 32 74 64 33 35 58 46 56 32 33 ]
T [ 30 7 251 251 1 0 0 188 131 124 86 90 108 109 86 76 72 59 68 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1307.1 MA1307 1 WRKY31 Arabidopsis thaliana
WRKY GCM
MA1307.2 MA1307 2 WRKY31 Arabidopsis thaliana
WRKY GCM
MA1307.3 MA1307 3 WRKY31 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0841.1

ChIP-seq Centrality
-log(P-value): 236.776

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0841.1

ChIP-seq Centrality
-log(P-value): 238.318

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: