Detailed information of matrix profile MA1306.1

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Profile summary
Name: WRKY11
Matrix ID: MA1306.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q9SV15  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 227 149 107 11 0 1 0 595 0 16 59 56 102 144 ]
C [ 67 109 358 0 1 0 0 0 597 47 20 42 70 85 ]
G [ 173 178 84 512 0 0 597 2 0 0 8 37 93 139 ]
T [ 130 161 48 74 596 596 0 0 0 534 510 462 332 229 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1306.1 MA1306 1 WRKY11 Arabidopsis thaliana
WRKY GCM
MA1306.2 MA1306 2 WRKY11 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0840.1

ChIP-seq Centrality
-log(P-value): 213.77

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0840.1

ChIP-seq Centrality
-log(P-value): 222.47

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: