Detailed information of matrix profile MA1302.1

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Profile summary
Name: WRKY65
Matrix ID: MA1302.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q9LP56  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 93 22 1 0 0 599 0 9 123 93 122 ]
C [ 419 0 0 0 0 0 600 127 34 84 99 ]
G [ 38 542 0 0 600 1 0 6 25 43 122 ]
T [ 50 36 599 600 0 0 0 458 418 380 257 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1302.1 MA1302 1 WRKY65 Arabidopsis thaliana
WRKY GCM
MA1302.2 MA1302 2 WRKY65 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0427.1

ChIP-seq Centrality
-log(P-value): 22711.5

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0427.1

ChIP-seq Centrality
-log(P-value): 22848.2

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: