Detailed information of matrix profile MA1300.1

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Profile summary
Name: WRKY6
Matrix ID: MA1300.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q9C519  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 41 1 0 0 0 285 0 0 77 74 58 68 59 75 101 110 63 87 78 ]
C [ 195 0 0 0 0 0 285 85 38 23 41 29 77 42 23 41 81 79 84 ]
G [ 21 262 0 0 285 0 0 0 37 43 89 84 19 44 82 49 65 39 34 ]
T [ 28 22 285 285 0 0 0 200 133 145 97 104 130 124 79 85 76 80 89 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1300.1 MA1300 1 WRKY6 Arabidopsis thaliana
WRKY GCM
MA1300.2 MA1300 2 WRKY6 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0839.1

ChIP-seq Centrality
-log(P-value): 365.033

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0839.1

ChIP-seq Centrality
-log(P-value): 353.134

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: