Detailed information of matrix profile MA1300.1

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Profile summary
Name: WRKY6
Matrix ID: MA1300.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q9C519  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 89 80 76 85 79 124 130 104 97 145 133 200 0 0 0 285 285 22 28 ]
C [ 34 39 65 49 82 44 19 84 89 43 37 0 0 0 285 0 0 262 21 ]
G [ 84 79 81 41 23 42 77 29 41 23 38 85 285 0 0 0 0 0 195 ]
T [ 78 87 63 110 101 75 59 68 58 74 77 0 0 285 0 0 0 1 41 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1300.1 MA1300 1 WRKY6 Arabidopsis thaliana
WRKY GCM
MA1300.2 MA1300 2 WRKY6 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0839.1

ChIP-seq Centrality
-log(P-value): 365.033

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0839.1

ChIP-seq Centrality
-log(P-value): 353.134

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: