Detailed information of matrix profile MA1296.1

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Profile summary
Name: WRKY46
Matrix ID: MA1296.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q9SKD9  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 8 15 18 19 0 0 0 22 22 6 0 ]
C [ 9 0 1 0 0 4 22 0 0 16 1 ]
G [ 4 4 3 3 22 0 0 0 0 0 19 ]
T [ 1 3 0 0 0 18 0 0 0 0 2 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1296.1 MA1296 1 WRKY46 Arabidopsis thaliana
WRKY GCM
MA1296.2 MA1296 2 WRKY46 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: